
Microbiome Test & Personalised Gut Health Protocol with Shotgun Metagenomic Sequencing
Our microbiome test uses shotgun metagenomic sequencing for a comprehensive gut health analysis, paired with a fully personalised, patient-centred experience and an evidence-based restoration protocol tailored to each individual's unique microbial composition.

Our Unique Approach to Microbiome Restoration
High-Resolution Testing
Our partner laboratory (Delta Bio) uses shotgun metagenomic sequencing — a modern technology more precise than conventional 16S rRNA tests. The method analyses the entire microbial DNA in the stool sample, enabling species-level bacterial identification, detection of archaea and fungi, and functional gene analysis.

Targeted Restoration Plan
We analyse lab results in the context of symptoms, medical history and lifestyle factors. The written assessment and personalised 2-3 month protocol specify the necessary steps with species-level precision: reducing overgrown bacteria, suppressing harmful species, and rebuilding missing protective organisms.

Multidisciplinary Experience
Our interdisciplinary team (physicians, psychologists and biologists) has prepared assessments based on nearly a thousand microbiome analyses for: digestive symptoms, gynaecological complaints, recurring infections, dermatological problems, neuropsychiatric symptoms, autoimmune and metabolic diseases.

“When developing the therapeutic strategy, we examine the microbiome composition in the context of symptoms, medical history and lifestyle factors.”
— HealWays approach
What a microbiome analysis helps with

Digestive disorders
- •Bloating, diarrhea/constipation
- •IBS, IBD (Crohn's, Colitis), Reflux and SIBO
- •Fatty liver, gallbladder issues
- •Malabsorption
- •Weight issues (gain/loss)

Metabolic & Hormonal Imbalances
- •Thyroid dysfunction
- •Abnormal cortisol levels
- •Gynecological issues: PCOS, endometriosis, irregular periods
- •Infertility (in both genders)
- •Insulin resistance, type 2 diabetes, metabolic syndrome

Psychological and neurological symptoms
- •Depression, mood swings
- •Anxiety, stress sensitivity
- •OCD, ADHD, autism traits
- •Sleep issues, headaches

Immune system disorders
- •Food intolerances
- •Histamine sensitivity
- •Autoimmune diseases
- •Immune dysfunctions
- •Chronic infections (bacterial/viral)
How Can We Help?
Not every path starts with a lab test. We want everyone to find the right entry point for their needs.
Complete Microbiome Diagnostics
For those who want the most accurate picture of their gut microbiome. Includes shotgun sequencing, detailed lab report and a personalised 2-3 month restoration protocol.
Nutrition & Lifestyle Consultation
For those who already have lab results or want to discuss specific nutrition and lifestyle questions. Includes result interpretation and development of an individual strategy.
Technology comparison of different microbiome tests
Shotgun metagenomics provides a substantially more detailed picture than conventional methods. In the table below, we compare the two technologies.
| Feature | 16S rRNA sequencing | Shotgun metagenomic sequencing(our advanced approach) |
|---|---|---|
| Target | ✕Single ribosomal RNA gene (16S) present in bacteria/archaea | ✓ Entire DNA content of the sample across all microbes |
| Taxonomic resolution | ✕Typically genus-level; limited species-level accuracy | ✓ Predominantly species-level, with potential subspecies/strain-level resolution |
| Microorganism types detected | ✕Primarily bacteria/archaea | ✓ Bacteria, archaea, viruses, fungi, parasites |
| Functional insight | ✕Minimal (identifies who is present) | ✓ Extensive (what genes/functions are present) |
| Clinical/therapeutic relevance | ✕Useful for broad profiling | ✓ Enables more precise, clinically actionable insights (e.g., toxin genes, antibiotic resistance) |
| Cost & complexity | ✓Lower cost, simpler lab pipeline | ✕ Higher cost, more complex data analysis & interpretation |
How the microbiome test works
Sample collection
Use the test kit at home. Simple and hygienic.
Lab analysis
Shotgun sequencing in ISO-accredited partner laboratory.
Assessment
Written expert assessment with personalized protocol.
Follow-up
90-min consultation + 3-month follow-up support.
Microbiome Test & Personalised Restoration Plan
Everything you need for a comprehensive assessment and restoration of your gut flora.
Starting at
- At-home stool sample collection kit
- Shotgun metagenomic microbiome lab analysis
- Complete digital laboratory report (≈50 pages)
- Written expert evaluation and a personalised 2 - 3 month protocol
- 1-hour microbiome consultation to discuss the results and the plan
- 3-month follow-up support
- Additional 30-minute control consultation
Why Shotgun Metagenomics?
Unlike conventional 16S rRNA tests, shotgun metagenomics maps the entire genetic material of the microbiome, providing a more accurate and detailed picture.
Uncertain about the next step? Start with an expert consultation.

Frequently Asked Questions
European Research. Expert Guidance.
HealWays is a functional medicine company based in Budapest. Our interdisciplinary team of physicians, biologists and psychologists works with the ISO-accredited Delta Bio laboratory.
Is the consultation in English?
Yes. Our team provides full consultation and assessment in English.
Where is the laboratory?
Our partner laboratory Delta Bio in Budapest is ISO-accredited and uses state-of-the-art shotgun metagenomics technology.
How secure is my data?
All services are GDPR-compliant. Your health data is encrypted in transit and at rest.



